Update olddocs to reflect current implementation state

- REGISTRY.md: Mark phases 1-4, 6-8 complete; phase 5 partial
- WEB_UI.md: Update Phase 7 checklist with completion status
- DESIGN.md: Note TUI replaced by PySide6 GUI, update structure
- PROJECT.md: Update source structure and database schema
- PROVIDERS.md, META_TOOLS.md, COLLECTIONS.md: Add status notes
- Add "Features Implemented Beyond Original Design" sections

Co-Authored-By: Claude Opus 4.5 <[email protected]>

olddocs/PROJECT.md

@@ -1,5 +1,9 @@
 # CmdForge Project Overview
 
+> **Document Status (January 2026)**: This overview is mostly accurate but the source structure
+> section is outdated. The TUI has been replaced by a PySide6 GUI. Database now has 25+ tables.
+> For current architecture, see `src/cmdforge/` directly.
+
 This document provides a comprehensive overview of the CmdForge project structure, components, and how everything fits together.
 
 ## What is CmdForge?
@@ -32,52 +36,68 @@ See `docs/diagrams/` for visual representations:
 
 ```
 src/cmdforge/
-├── cli.py              # Entry point, subcommand routing
+├── cli/                # CLI commands
+│   ├── __init__.py     # Entry point, subcommand routing
+│   └── registry_commands.py  # Registry CLI commands
 ├── tool.py             # Tool dataclasses, YAML loading
 ├── runner.py           # Step execution engine
 ├── providers.py        # AI provider abstraction
+├── profiles.py         # AI persona profiles
 ├── config.py           # Global configuration
-├── manifest.py         # Tool manifest handling
+│
+├── gui/                # PySide6 Desktop GUI (primary UI)
+│   ├── main_window.py  # Main application window
+│   ├── pages/          # Tools, Registry, Providers, Profiles pages
+│   ├── dialogs/        # Step editors, Publish, Connect dialogs
+│   └── workers/        # Background threads for API calls
 │
 ├── registry/           # Registry API Server
-│   ├── app.py          # Flask API application
-│   ├── db.py           # Database operations, FTS5 search
+│   ├── app.py          # Flask API with 100+ endpoints
+│   ├── db.py           # Database operations, FTS5 search (25+ tables)
 │   ├── rate_limit.py   # API rate limiting
-│   ├── sync.py         # Git sync for tool submissions
-│   ├── categorize.py   # Auto-categorization
-│   └── similarity.py   # Similar tool recommendations
+│   ├── scrutiny.py     # Automated code analysis
+│   ├── similarity.py   # Duplicate detection
+│   └── sync.py         # Git sync for tool submissions
 │
 ├── web/                # Web UI Application
-│   ├── app.py          # Flask web app, Sentry integration
+│   ├── app.py          # Flask web app
 │   ├── routes.py       # Page routes and handlers
 │   ├── auth.py         # Password hashing, login/register
 │   ├── sessions.py     # Session management
-│   ├── docs_content.py # Documentation text content
-│   ├── seo.py          # Sitemap, robots.txt
-│   ├── filters.py      # Jinja template filters
+│   ├── forum/          # Forum blueprint
 │   ├── templates/      # Jinja HTML templates
-│   └── static/         # CSS, JS, images
+│   └── static/         # CSS (Tailwind), JS, images
 │
-├── registry_client.py  # CLI client for registry API
-├── resolver.py         # Dependency resolution
-│
-├── ui.py               # TUI dispatcher
-├── ui_urwid.py         # urwid TUI implementation
-└── ui_snack.py         # newt/snack TUI fallback
+└── registry_client.py  # CLI client for registry API
 ```
 
 ## Database Schema
 
-SQLite database at `data/cmdforge.db`:
+SQLite database at `~/.cmdforge/registry.db` (or via `CMDFORGE_REGISTRY_DB` env var):
 
 | Table | Purpose |
 |-------|---------|
-| `publishers` | User accounts (username, email, password_hash) |
-| `tools` | Published tools (name, owner, description, config) |
+| `publishers` | User accounts with roles, banning, verification |
+| `tools` | Published tools with moderation status, fork tracking |
 | `api_tokens` | Authentication tokens for API access |
-| `download_stats` | Tool download tracking |
-| `pageviews` | Analytics for tool detail pages |
+| `download_stats` | Tool download tracking by date |
+| `reviews` | Tool reviews with 1-5 star ratings |
+| `review_votes` | Helpful/unhelpful votes on reviews |
+| `tool_issues` | Bug, security, compatibility issue reports |
+| `collections` | Curated tool groups |
+| `announcements` | Admin announcements |
+| `featured_tools` | Featured tool placement |
+| `featured_contributors` | Featured publisher placement |
+| `reports` | Abuse reports for moderation |
+| `audit_log` | Admin action audit trail |
+| `pairing_requests` | App pairing flow |
+| `web_sessions` | Session storage |
+| `consents` | User consent for analytics/ads |
+| `pageviews` | Analytics tracking |
 | `tools_fts` | Full-text search index (FTS5) |
+| `tool_stats` | Cached tool statistics |
+| `publisher_stats` | Cached publisher statistics |
+| `registry_settings` | Runtime-configurable settings |
 
 ## API Endpoints